HPO archive of the ontology and annotations
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Updated
Mar 9, 2017
HPO archive of the ontology and annotations
Simulation of disease-phenotype annotation with imprecision and noise.
Ontology for the description human phenotypes
A modern Java library for working with (biological) ontologies.
🐟 Zebrafish Phenotype Ontology: Build Tools (OBSOLETE)
HPO web browser created with Vaadin
Selects possible pathogenic variants from an Alamut output
Bayesian ontology querying from Bauer et al.
Code to generate ontology annotated objects (e.g. HPO annotated patients)
PhenoUnit testing framework
A repository with Advanced Machine Learning Course Assignments (FFNN, AutoEncoders, CNN, TL, HPO)
A Fair Classifier based on Adversarial Debiasing
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The QC software for the OBO version of HPO
Research Practical and Master Thesis topic for the University of Luxembourg. Natural language processing pipeline to extract HPO terms from clinical notes or EHR, annotate genes and diseases to the extracted terms and prioritize them by their frequency.
Bayesian Optimization Hyperband Hyperparameter Optimization
Website for the Phenomics and Machine Learning Team
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