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A modern Java library for working with (biological) ontologies.

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Phenomics/ontolib

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OntoLib

A modern Java library for working with (biological) ontologies.

In Brief

  • Language/Platform: Java >=8
  • License: BSD 3-Clause Clear
  • Version: 0.3
  • Authors:
    • Sebastian Bauer
    • Peter N. Robinson
    • Sebastian Koehler
    • Max Schubach
    • Manuel Holtgrewe
  • Availability:
    • Maven module ontolib-core for dealing with (biological) ontologies (Javadoc via javadoc.io).
    • Maven module ontolib-io for reading ontologies from OBO files (Javadoc via javadoc.io).
    • Maven module ontolib-cli for performing empirical score distribution computation as a stand-alone program.