deseq2
Here are 90 public repositories matching this topic...
Simple Nextflow RNA-Seq pipeline
-
Updated
Jan 24, 2024 - Nextflow
Differential Gene Expression analysis in R using DESeq2
-
Updated
May 3, 2024 - HTML
Code to reproduce Ponroy, et. al, 2020 in Human Molecular Gentetics
-
Updated
May 16, 2020 - R
R workflows used to analyze microbial community sequence data
-
Updated
Apr 21, 2021 - R
SBC analysis with DIGIST (In progress)
-
Updated
Apr 13, 2023 - R
Tools to count repeat elements form RepeatMasker (RMSK) and infer the enrichment of repeats
-
Updated
Sep 29, 2016 - R
Investigate the role of mtDNA in the sex determination/development of Potamilus streckersoni, a freshwater mussel with doubly uniparental mitochondrial inheritance. Scripts for DESeq2, WGCNA, GSEA, AlphaFold/AlphaPulldown, and mt-sncRNA validation.
-
Updated
Oct 1, 2023 - R
Differential expression analysis in R for RNA sequence reads of fission yeast.
-
Updated
Apr 20, 2018 - R
Jupyter notebooks for DGE results and ontology analysis and visualisation.
-
Updated
Feb 26, 2024 - Jupyter Notebook
Tuberculosis and the microbiome
-
Updated
Feb 18, 2021 - HTML
-
Updated
Jul 5, 2021 - HTML
A collection of Jupyter notebooks for basic analysis of the data from the "BeatAML" study by Tyner et al. (2018)
-
Updated
Jul 19, 2023 - Jupyter Notebook
A R shiny dashboard of differential expression in human embryonic stem cells.
-
Updated
Apr 6, 2023 - R
Improve this page
Add a description, image, and links to the deseq2 topic page so that developers can more easily learn about it.
Add this topic to your repo
To associate your repository with the deseq2 topic, visit your repo's landing page and select "manage topics."