Toolbox for Studying Bacteria, Archaea, and Complex Taxons
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Updated
Mar 30, 2023 - HTML
Toolbox for Studying Bacteria, Archaea, and Complex Taxons
Detailed bioinformatics scripts and methods used in the NAM genome paper.
Code for design of diagnostic PCR primers, and metabarcoding markers.
Scripts and procedures for detecting positively selected genes and codons in primates
Bystro genetic analysis (annotation, filtering, statistics)
This project proposes to contribute to fill the knowledge gap about Covid-19SARS-CoV-2 in Brazil and with the global knowledge about the pathogen. The scientific community and governments of other countries are looking for actions along these lines. The United Kingdom recently established a research network for genomic studies of SARS-CoV-2Covid…
Split multi fasta file into single fasta files
A collection of useful bioinformatics scripts.
Scripts to download the PacBio, ONT and MiSeq datasets used in https://www.nature.com/articles/s41598-017-03996-z and run the pipelines as described in the paper or simply download the final assemblies as generated by the authors.
Repo for running command line-based BLAST in Jupyter environment provided via Binder.
A framework for semi-automated analysis of Amplicon Sequencing data
Talleres Internacionales de Bioinformática - Centro de Ciencias Genómicas, UNAM, Cuernavaca, México
programs and scripts, mainly python, for analyses related to nucleic or protein sequences
Explore biomolecular pathways in Reactome from the command-line or a Python script
A set of processes/pipelines for bioinformatics
This repository will be helpful to start using python for your Bioinformatics projects.
High-throughput gene to knowledge mapping through massive integration of public sequencing data.
Set of scripts to process HybSeq target enrichment HTS data (on computing grids).
bioinformatic utility libraries in python
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