Intervene: a tool for intersection and visualization of multiple genomic region and gene sets
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Updated
Oct 28, 2023 - Python
Intervene: a tool for intersection and visualization of multiple genomic region and gene sets
WebAssembly modules for genomics
RNAseq pipeline for alternative splicing junctions
Python Library for data analysis based on GMQL
Seave is a web platform that enables genetic variants to be easily filtered and annotated with in silico pathogenicity prediction scores and annotations from popular disease databases. Seave stores genomic variation of all types and sizes, and allows filtering for specific inheritance patterns, quality values, allele frequencies and gene lists. …
gia: Genomic Interval Arithmetic
Get exons from a transcriptome and raw genomic reads using abyss-bloom and bedtools
An R-package for daily tasks required to handle biological data as well as avoid re-coding of small functions for quick but necessary data management.
Predicting Tissue Specific Enhancer Activity from Epigenetic Marks and Sequence
bedtools environment containerized for singularity
Sequencing data preprocessing
program to make bed12 files from bed 6 files based on the name col of the bed6 file.
Various bioinformatics tools in one package
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