bedtools
Here are 28 public repositories matching this topic...
Sequencing data preprocessing
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Jun 18, 2018 - R
Predicting Tissue Specific Enhancer Activity from Epigenetic Marks and Sequence
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Dec 3, 2014 - Python
bedtools environment containerized for singularity
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May 22, 2018 - Shell
An R-package for daily tasks required to handle biological data as well as avoid re-coding of small functions for quick but necessary data management.
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May 25, 2024 - R
Various bioinformatics tools in one package
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Jan 29, 2020 - Python
Plant DNA Annotation and Preparation for Neural Networks
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Mar 25, 2024 - Python
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May 22, 2017 - Shell
bionano annovar annotation
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Jul 28, 2020 - Perl
Assembly of RNA transcriptome, differential expression analysis, identification of lncRNA candidates based on genomic context and protein coding potential.
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Feb 9, 2024 - Shell
Useful NGS utilities for everyday use in the form of stand-alone tool.
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Dec 2, 2022 - Java
Get exons from a transcriptome and raw genomic reads using abyss-bloom and bedtools
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Jul 28, 2020 - Python
program to make bed12 files from bed 6 files based on the name col of the bed6 file.
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Apr 8, 2019 - Shell
A beginner’s guide to Bioinformatics
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Mar 2, 2023
Library-free horizontal transfer detection, with a focus on transposable element invasions
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Mar 13, 2024 - Shell
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