ShahCompBio
Computational biology tools from the Shah Lab
Popular repositories
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hmmcopy_utils
hmmcopy_utils PublicTools for extracting read counts and gc and mappability statistics in preparation for running HMMCopy.
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single_cell_pipeline
single_cell_pipeline PublicSingle Cell Analysis Automated Workflow
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MultiModalMuSig.jl
MultiModalMuSig.jl PublicA Julia package for extracting mutation signatures using topic models
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spectrum-tme
spectrum-tme PublicSupporting material for publication: "Ovarian cancer mutational processes drive site-specific immune evasion"
Repositories
Showing 10 of 127 repositories
- scrna_demultiplexing Public
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- cellranger_utils Public
- bulk-illumina-rnaseq Public Forked from nf-core/rnaseq
RNA seq analysis pipeline for alignment and quantification of bulk illumina data
- onboarding Public
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- alhenaloader Public
- scgenome-deprecated Public
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