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@scottx611x scottx611x released this 30 Aug 22:12
· 466 commits to develop since this release
v1.6.6
2a63aec

NOTE:

Will need to run the following to update the Solr index and add theintervene visualization tool, respectively:

  • ./manage.py update_index
  • ./manage.py load_tools --visualizations intervene

Implemented enhancements:

  • Dashboard Performance Enhancement #2909
  • Add Tools #2782
  • Dashboard Alpha: History panel dates out of order #2768
  • Provenance help wording #2767
  • Tool panel notifications can push launcher down off the screen #2766
  • Better Organization for ToolPanel selection/ tool_definitions api response #2544
  • update style of group join confirmation page #2436
  • File Browser UI - deselect / reset tool #2391
  • Retrieve Cognito identity pool ID directly from AWS API #2205
  • DataSet Upload Intro JS logs comments to the console #1775
  • UI - Uniform Modals #1489
  • File Broswer/ Visualiztion should utilize auxiliary\_file\_generation\_task\_state #1484
  • Data Set 2 - Save position on dynamic scroll #1452
  • create workflow: FASTQ replicate merging #293
  • create workflow: BAM replicate merging #292

Fixed bugs:

  • Handle ValueError in generate_solr_params #2931
  • Internal Server Error when Fetching Studies for a DataSet #2922
  • CSV download and script to get all files are truncated #2892
  • Handle ValueError in insert_facet_field_filter #2729
  • User-files filter bug #2710
  • Text in third tutorial is centered #2697
  • Data Set Import -> Associated data files waiting to be uploaded bug #2691
  • User/Files Attributes Fields #2678
  • FileStoreItem pointing to tabular metadata file has incorrect source #2669
  • RuntimeError in files API #2623
  • UnicodeEncodeError in UserProfile #2557
  • Public files momentarily not viewable (when not logged in) #2554
  • WebDriverException in test_HiGlass #2538
  • Various Django admin pages yield 500 errors on AWS-deployed Refinery Instances #2165
  • Intermittent Travis CI build failure in test_visualization_container_launch_IGV #1996
  • Second search for "ce" seems to bring up a number of title-less datasets #1922
  • Synonym search sometimes causes weird results #1011
  • Galaxy workflow import fails when Galaxy returns HTTP 500 error. #280

Closed issues:

  • Upgrade Guardian 1.4.9 #2935
  • Download links don't show after closing the Tool Panel #2895
  • UI does not update after group delete #2889
  • Distracting "Register" and "Login" tool tips #2888
  • "Invite New Member" modal should have 2nd phase with only one button #2883
  • Node functionality is split between core and data_set_manager #2837
  • Upgrade PostgreSQL version to 9.3.20 #2548
  • Tool Launch: Input files ? popover shows ui artifact on hover #2526
  • File browser sidebar rendering in short windows #2364
  • Remove igv & higlass Selenium tests in favor of a lightweight example #2238
  • Cross-dataset browser: genotype facets max out at 100? #2148
  • groups: Blank lines / random order (but do we even need it?) #2121
  • Remove unused templates #1993
  • user/files infinite scroll #1956
  • Understand solr errors in logs for /user/files #1938
  • filebrowser2: "File Display" selector positioning #1901
  • Password reset page missing box / button #1877
  • Data Set 2 - Correct font in node selection popover #1871
  • Implement data set preview panel for data sets with multiple studies #1001

Merged pull requests:

Assets 2