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162 Open 184 Closed
162 Open 184 Closed
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Issues list

I want to build an index with a geneses I have. Kallisto index errors out.
#438 opened May 13, 2024 by lcamVz
1
Using kb-python for mars-seq
#437 opened May 10, 2024 by sam-shariati
Question about kallisto indexes
#435 opened Apr 24, 2024 by st4302
1
kallisto gene vs transcript count
#434 opened Apr 15, 2024 by Rajesh-HKU
4
Facing issues while building on PPC64LE architecture.
#431 opened Apr 3, 2024 by vinodk99
4
Kallisto handling multiple reads from single transcript?
#428 opened Mar 5, 2024 by stromk
1
Kallisto for Parsebio
#427 opened Feb 28, 2024 by rootze
1
kallisto 0.50.1 fails with "Illegal instruction" when built on machines with AVX-512
#424 opened Feb 14, 2024 by stianlagstad
2
is it the 'clipped off poly-A tail' and 'clipped off poly-A tail' right?
#422 opened Jan 8, 2024 by Bianzh1024
1
Mapping kallisto equivalence classes to actual transcript sequences
#421 opened Dec 18, 2023 by rubenchazarra
8
kallisto quant 0.50.1 linux, illegal instruction
#420 opened Dec 14, 2023 by deborah-chasman
1
Kallisto total UMI difference between velocity and novelocity modes. (single cell)
#419 opened Dec 11, 2023 by mortunco
4
estimate read counts of a specific region of a transcript
#417 opened Nov 20, 2023 by zixuanxie
1
Change STORM-seq to uppper case for compatibility with kb_python
#415 opened Nov 13, 2023 by genomics-kl
A few minor patches for portability
#413 opened Nov 4, 2023 by outpaddling
kallisto 0.50.0 can't index
#411 opened Nov 2, 2023 by dariolez
14
UMI count per gene
#408 opened Oct 26, 2023 by tsofiya
8
Kallisto process killed or computer freezes while indexing
#405 opened Oct 23, 2023 by hkarakurt8742
1
Incompatible indices error message seems to refer to incorrect version numbers
#400 opened Sep 25, 2023 by jdreyf
3
Kallisto not able to find the index file or abundance.tsv
#397 opened Sep 9, 2023 by swinnier
3
does kallisto require unsorted reads?
#396 opened Sep 5, 2023 by anoronh4
6
Documentation out of date
#392 opened Aug 14, 2023 by mfansler
3
Feature request: Add support for xz and zstd
#383 opened Jun 21, 2023 by outpaddling
Can't Bootstrap even after attempts to compile with cmake
#382 opened Jun 1, 2023 by sikayler
7
Why is there a big difference between kallisto and cellranger count result？
#376 opened Feb 17, 2023 by aizhimin
1
ProTip! Adding no:label will show everything without a label.