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I want to build an index with a geneses I have. Kallisto index errors out. #438

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lcamVz opened this issue May 13, 2024 · 2 comments
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@lcamVz
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lcamVz commented May 13, 2024

I am running kallisto index and I am getting an error what this could be:

line 27: 1493676 Illegal instruction (core dumped) kallisto index -i genes.99.idx genes.99.fasta

I want to take my genes from a metagenome to build the index to see if I can run metakallisto is the logic works or am I missing something.

@Yenaled
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Yenaled commented May 13, 2024

Either your FASTA file is corrupted or you need to re-install kallisto (from source)

@lcamVz
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lcamVz commented May 14, 2024

I reinstalled from source and added the flags and it worked.

@lcamVz lcamVz closed this as completed May 14, 2024
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