idemux test_data.config #5391
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idemux test_data.config #5391
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SPPearce
reviewed
May 2, 2024
SPPearce
reviewed
May 7, 2024
Comment on lines
+16
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+17
| path "demultipexing_stats.tsv" , emit: stats | ||
| path "versions.yml" , emit: versions |
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Suggested change
| path "demultipexing_stats.tsv" , emit: stats | |
| path "versions.yml" , emit: versions | |
| path "demultipexing_stats.tsv" , emit: stats | |
| path "versions.yml" , emit: versions |
SPPearce
reviewed
May 7, 2024
Comment on lines
+31
to
+46
| - versions: | ||
| type: file | ||
| description: File containing software versions | ||
| pattern: "versions.yml" | ||
| - fastq: | ||
| type: file | ||
| description: Demultiplexed sample FASTQ files | ||
| pattern: "*.fastq.gz" | ||
| - undetermined: | ||
| type: file | ||
| description: Optional undetermined sample FASTQ files | ||
| pattern: "Undetermined_R?.fastq.gz" | ||
| - stats: | ||
| type: file | ||
| description: Demultiplexing Stats | ||
| pattern: "demultipexing_stats.tsv" |
There was a problem hiding this comment.
Suggested change
| - versions: | |
| type: file | |
| description: File containing software versions | |
| pattern: "versions.yml" | |
| - fastq: | |
| type: file | |
| description: Demultiplexed sample FASTQ files | |
| pattern: "*.fastq.gz" | |
| - undetermined: | |
| type: file | |
| description: Optional undetermined sample FASTQ files | |
| pattern: "Undetermined_R?.fastq.gz" | |
| - stats: | |
| type: file | |
| description: Demultiplexing Stats | |
| pattern: "demultipexing_stats.tsv" | |
| - fastq: | |
| type: file | |
| description: Demultiplexed sample FASTQ files | |
| pattern: "*.fastq.gz" | |
| - undetermined: | |
| type: file | |
| description: Optional undetermined sample FASTQ files | |
| pattern: "Undetermined_R?.fastq.gz" | |
| - stats: | |
| type: file | |
| description: Demultiplexing Stats | |
| pattern: "demultipexing_stats.tsv" | |
| - versions: | |
| type: file | |
| description: File containing software versions | |
| pattern: "versions.yml" |
|
@jaanckae , I can't update your branch, if you can make the two requested changes we can merge this in I think. |
SPPearce
approved these changes
May 7, 2024
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PR checklist
Closes #XXX
versions.ymlfile.labelnf-core modules test <MODULE> --profile dockernf-core modules test <MODULE> --profile singularitynf-core modules test <MODULE> --profile condanf-core subworkflows test <SUBWORKFLOW> --profile dockernf-core subworkflows test <SUBWORKFLOW> --profile singularitynf-core subworkflows test <SUBWORKFLOW> --profile conda