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17 Open 116 Closed
17 Open 116 Closed
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Issues list

AMPLIFY_PREDICT exits with a ValueError while checking input bug Something isn't working
#373 opened May 5, 2024 by m3hdad
deeparg 1.0.4 required to correctly fetch DBs bug Something isn't working
#370 opened May 2, 2024 by m3hdad
GUNZIP module is confused by repeated patterns in sample name and fasta path. bug Something isn't working
#367 opened Apr 26, 2024 by m3hdad
Workflow diagram is broken in dev bug Something isn't working
#364 opened Apr 24, 2024 by jfy133
Add missing essential parameters for antismash documentation Improvements or additions to documentation enhancement Improvement for existing functionality
#356 opened Apr 5, 2024 by Darcy220606
Mention AMPcombi and DRAMP database in usage.md documentation Improvements or additions to documentation enhancement Improvement for existing functionality
#354 opened Apr 4, 2024 by jasmezz
2
Add BAKTA results to MultiQC enhancement Improvement for existing functionality
#339 opened Feb 14, 2024 by jfy133
Update AMPcombi to version 0.2.1 enhancement Improvement for existing functionality
#336 opened Feb 7, 2024 by Darcy220606
@Darcy220606
1
Add module: resfinder enhancement Improvement for existing functionality
#330 opened Jan 23, 2024 by jasmezz
Adapt deepBGC to use GPUs enhancement Improvement for existing functionality
#326 opened Dec 19, 2023 by Darcy220606
4
Add pharokka to nf-core/funcscan feature-request Request for a new pipeline feature
#329 opened Dec 15, 2023 by CarsonJM
@CarsonJM
Optimize antismash usage docs enhancement Improvement for existing functionality
#313 opened Oct 11, 2023 by jasmezz
Benchmarking tests showing resource values are suboptimal bug Something isn't working
#292 opened Jul 5, 2023 by jfy133
Apply nf-test on funcscan enhancement Improvement for existing functionality
#280 opened May 26, 2023 by louperelo
11 of 24 tasks
1.2 - Brazilian Escondidinho
@louperelo
Consider adding annotation tools to MultiQC report enhancement Improvement for existing functionality
#277 opened May 24, 2023 by jfy133
@louperelo
Allow input of pre-annotated ORFs enhancement Improvement for existing functionality
#255 opened Apr 4, 2023 by BenPonBiobrain 1.2 - Brazilian Escondidinho
@jfy133
7
Consider passing the annotation tool output to modules input for more standardization
#179 opened Dec 21, 2022 by Darcy220606
4 tasks
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