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Pull requests: nextstrain/nextclade

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Pull requests list

feat: mutations relative to arbitrary node
#1454 opened May 14, 2024 by ivan-aksamentov Loading…
7 of 11 tasks
3
feat(cli): add "sort-and-run" subcommand
#1439 opened Apr 18, 2024 by ivan-aksamentov Loading…
1
Upgrade rust binary deps
#1412 opened Feb 12, 2024 by ivan-aksamentov • Draft
1
Upgrade rust lib deps
#1411 opened Feb 12, 2024 by ivan-aksamentov • Draft
1
chore(deps): bump auspice from 2.51.0 to 2.52.0 in /packages_rs/nextclade-web
dependencies Pull requests that update a dependency file javascript Pull requests that update Javascript code
#1407 opened Feb 9, 2024 by dependabot bot Loading…
1
feat: add dataset info to output json [wip]
#1311 opened Nov 3, 2023 by ivan-aksamentov • Draft
1
feat(web): handle rust panics in wasm module gracefully [wip]
#1310 opened Nov 3, 2023 by ivan-aksamentov • Draft
1
feat(gff): pick gene/cds/protein preferentially from "nextclade_name"
#1302 opened Oct 31, 2023 by corneliusroemer Loading…
1
Add dataset images
#1262 opened Sep 28, 2023 by ivan-aksamentov • Draft
1
feat: Reduce kmer spacing for short sequences
#1242 opened Aug 30, 2023 by corneliusroemer Loading…
1
feat/better seed debug logging
#1240 opened Aug 30, 2023 by corneliusroemer Loading…
5
fix: reimplement alignment stripes on top of signed ranges
#1227 opened Aug 2, 2023 by ivan-aksamentov • Draft
1
feat: add detailed version information
#1202 opened Jul 17, 2023 by ivan-aksamentov Loading…
3
refactor: inline pieces of bio-rust crate related to FM-index
#1194 opened Jul 10, 2023 by ivan-aksamentov • Draft
1
feat(web): add colored boxes in gene selector
#1184 opened Jun 29, 2023 by ivan-aksamentov • Draft
1
Toggle between nuc and aa modes in gene views
#1182 opened Jun 28, 2023 by ivan-aksamentov • Draft
1
feat(web): show clade statistics
#1096 opened Jan 26, 2023 by ivan-aksamentov • Draft
1
feat: calculate composite fitness
#1008 opened Oct 3, 2022 by ivan-aksamentov • Draft
2
feat: add secondary clade-like values
#985 opened Sep 5, 2022 by ivan-aksamentov Loading…
1
6
feat: output Genebank feature table file
#982 opened Sep 1, 2022 by ivan-aksamentov • Draft
9 of 12 tasks
1
1
fix: attempt to fix old browsers [wip]
#976 opened Aug 30, 2022 by ivan-aksamentov • Draft
3
feat: Web UI cleanup
#975 opened Aug 29, 2022 by ivan-aksamentov • Draft
2 of 14 tasks
1
perf(web): performance tweaks
#972 opened Aug 28, 2022 by ivan-aksamentov • Draft
3
Fix CLI dataset table on Windows
#904 opened Jun 27, 2022 by ivan-aksamentov • Draft
1
1
feat(web): add global limit on total number of displayed markers
#860 opened Jun 15, 2022 by ivan-aksamentov • Draft
4
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