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funannotate v1.7.4

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@nextgenusfs nextgenusfs released this 22 Feb 20:09
· 340 commits to master since this release

Okay, so apparently I lied about bug fixes before py3 release. Here are some quick ones.

Also -- some users have said that conda recipe fails to find a solution, with the help of @reslp this is perhaps caused by ete3 package as a dependency. Since ete3 is only used in funannotate for the dN/dS calculation in funannotate compare, I'm going to remove it from conda recipe as a dependency. Users that would like to continue using the dN/dS function in compare will need to manually install ete3 (ie conda could work on your system or pip, etc).

  • update the log file copy/remove in funannotate annotate which causes a problem in singularity container
  • encoding bug fixes for some PFAM results
  • fix for funannotate iprscan which was not correctly combining XML files with newer versions of Interproscan.