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Pinned

  1. funannotate funannotate Public

    Eukaryotic Genome Annotation Pipeline

    Python 289 82

  2. amptk amptk Public

    AMPtk: Amplicon ToolKit for NGS data (formally UFITS)

    Python 35 14

  3. gfftk gfftk Public

    GFF toolkit

    Python 5 1

  4. gapmm2 gapmm2 Public

    gapmm2: gapped alignment using minimap2 (align transcripts to genome)

    Python 3 1

  5. buscolite buscolite Public

    BUSCOlite: simplified conserved marker gene prediction for genome annotation

    Python 3

  6. funannotate2 funannotate2 Public

    Eukaryotic genome annotation software.

    Python 2