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improve GFF3 parsing in funannotate annotate allow for non-funannotate identifiers (hopefully this catches most of them)
--aligners option was missing from help menu in train/update
add --debug flag to funannotate iprscan -- there is potentially still an issue here combining results from the newest release of Interproscan -- I need some intermediate results to see what the problem is
fix GO annotations parsing for more versions of goatools #363
fix for bug in the "gene start or end in a gap" function
make sure funannotate annotate re-runs tbl file generation if script is re-run
fix in PASA function logic where PASA db not found if using --gff and --fasta input.