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funannotate v1.7.2
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@nextgenusfs nextgenusfs released this 29 Dec 03:56
· 369 commits to master since this release
1.7.2
d6b4aa4
  • busco internal run now uses the local augustus config path, so hopefully write access to $AUGUSTUS_CONFIG_PATH is no longer required
  • long reads are now processed to remove forward slashes from names if present -- this was causing problems with PASA #326 #250
  • added augustus hints file generation when using RNA-seq data. Also added a check for --transcript_evidence if found in --transcript_alignments, ie so extra transcripts can be added instead of only those used to generate alignments in funannotate train. #360
  • fix typo in funannotate check
  • fix for proteinortho issue in funannotate compare #350
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