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funannotate v1.5.2
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@nextgenusfs nextgenusfs released this 24 Feb 20:17
· 513 commits to master since this release
1.5.2
faafdc4
  • restructure augustus accessory scripts calls so that they don't have to be in same location as the exe, i.e. this used to be a bug if you used conda installed augustus as it puts the scripts in a different location than the default augustus release folder
  • added a check to busco routine to default to a single thread if tblastn version is found that might have multithread issues
  • allow a min number of gene models to use for Augustus training, --min_training_models in funannotate predict
  • limit genemark to 64 cpus -- it will die if you try to give it more
  • fix shortBAM declaration in funannotate update
  • for genemark-ET set score of introns to 500, otherwise seems to be dying.
  • updated weights for different gene models -- would be nice to have this be a customizable option....
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