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Jon Palmer authored and Jon Palmer committed Aug 17, 2016
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Expand Up @@ -32,7 +32,7 @@ To see the help menu, simply type `funannotate` in the terminal window. Similar
$ funannotate
Usage: funannotate <command> <arguments>
version: 0.3.4
version: 0.3.7
Description: Funannotate is a genome prediction, annotation, and comparison pipeline.
Expand All @@ -44,7 +44,10 @@ Command: clean Find/remove small repetitive contigs
annotate Assign functional annotation to gene predictions
compare Compare funannotated genomes
fix Remove adapter/primer contamination from NCBI error report
fix Remove adapter/primer contamination from NCBI error report
check Check Python module versions installed
setup Setup/Install databases and check dependencies
```

###Using funannotate: a simple walkthrough
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