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Popular repositories

  1. GraphBin GraphBin Public

    ✨🧬 Refined binning of metagenomic contigs using assembly graphs

    Python 81 7

  2. MetaCoAG MetaCoAG Public

    🚦🧬 Binning Metagenomic Contigs via Composition, Coverage and Assembly Graphs

    Python 42 3

  3. GraphBin2 GraphBin2 Public

    ☯️🧬 Refined and Overlapped Binning of Metagenomic Contigs Using Assembly Graphs

    Python 27 1

  4. VStrains VStrains Public

    VStrains is a de novo approach for reconstructing strains from viral quasispecies.

    Python 14 3

  5. ConDiGA ConDiGA Public

    🗂️🧬 Contigs directed gene annotation for accurate protein sequence database construction in metaproteomics

    Python 3

  6. metagenomic_binning_review metagenomic_binning_review Public

    Code used to analyse and plot metadata of metagenomic binning tools

    Jupyter Notebook 3 1

Repositories

Showing 8 of 8 repositories
  • GraphBin2 Public

    ☯️🧬 Refined and Overlapped Binning of Metagenomic Contigs Using Assembly Graphs

    Python 27 BSD-3-Clause 1 11 0 Updated May 7, 2024
  • GraphBin Public

    ✨🧬 Refined binning of metagenomic contigs using assembly graphs

    Python 81 BSD-3-Clause 7 6 1 Updated May 6, 2024
  • MetaCoAG Public

    🚦🧬 Binning Metagenomic Contigs via Composition, Coverage and Assembly Graphs

    Python 42 GPL-3.0 3 7 (2 issues need help) 0 Updated Apr 24, 2024
  • gbintk Public

    🌟🧬 GraphBin-Tk: Assembly graph-based metagenomic binning toolkit

    Python 1 GPL-3.0 0 0 0 Updated Apr 23, 2024
  • metagenomic_binning_review Public

    Code used to analyse and plot metadata of metagenomic binning tools

    Jupyter Notebook 3 MIT 1 0 0 Updated Apr 18, 2024
  • ConDiGA Public

    🗂️🧬 Contigs directed gene annotation for accurate protein sequence database construction in metaproteomics

    Python 3 MIT 0 0 0 Updated Mar 22, 2024
  • metagenomic-database-utilities Public

    Scripts used to create metagenomic databases for metaproteomic analysis

    Jupyter Notebook 0 BSD-3-Clause 0 0 0 Updated Feb 6, 2024
  • VStrains Public

    VStrains is a de novo approach for reconstructing strains from viral quasispecies.

    Python 14 MIT 3 0 0 Updated Feb 9, 2023

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