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23 Open 33 Closed
23 Open 33 Closed
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Issues list

check if the directory exists before creating
#150 opened Mar 14, 2024 by caballero
incorrect top species in report bug Something isn't working
#147 opened Feb 8, 2024 by caballero
@caballero
copy - permissions
#146 opened Feb 5, 2024 by WardDeb
pytests enhancement New feature or request
#145 opened Jan 12, 2024 by WardDeb
get_latest seqdir enhancement
#143 opened Jan 5, 2024 by WardDeb
promethion ready - checklist enhancement New feature or request
#142 opened Jan 3, 2024 by WardDeb
5 tasks
@caballero @WardDeb @thomasmanke
1
porechop memory footprint
#141 opened Jan 3, 2024 by WardDeb
dorado aligner
#140 opened Dec 22, 2023 by WardDeb
make basecalling optional
#139 opened Dec 21, 2023 by WardDeb
modbam2bed - optional
#138 opened Dec 21, 2023 by WardDeb
samtools flagstat encounters older index help wanted Extra attention is needed
#128 opened Nov 20, 2023 by thomasmanke
fix GPU check: gpu_available()
#127 opened Nov 19, 2023 by thomasmanke
multiqc and Kraken (with unclassified reads)
#126 opened Nov 8, 2023 by thomasmanke
barcoding information
#125 opened Nov 8, 2023 by thomasmanke
porechop and multiqc
#121 opened Oct 23, 2023 by thomasmanke
pycoQC failures
#119 opened Oct 22, 2023 by thomasmanke
pycoQC after alignment
#115 opened Sep 28, 2023 by thomasmanke
reorganize config dict and utilization
#114 opened Sep 27, 2023 by thomasmanke
decluster and compress sequencing_summary*.txt
#109 opened Sep 27, 2023 by thomasmanke
guppy failure - exitcode
#54 opened Feb 3, 2023 by WardDeb
1
pycoqc updates enhancement New feature or request
#41 opened Oct 18, 2022 by WardDeb
extra transfers enhancement New feature or request
#28 opened Aug 15, 2022 by WardDeb
2 of 4 tasks
@WardDeb
1
todo
#18 opened Apr 29, 2022 by LeilyR
6 of 9 tasks
4
ProTip! Updated in the last three days: updated:>2024-05-21.