Hello, welcome!

I currently work on proteogenomic analysis¹, whose generic features are collected for reproducible research.

Footnotes

1. CASP14-t1091

   The sunflowr figure is from CCTV4 covering Baiyin, Gansu province, China.

   The protein diagram is generated from Jumper, J., et al. (2021). Highly accurate protein structure prediction with AlphaFold. Nature 596(7873): 583-589, https://doi.org/10.1038/s41586-021-03819-2 (Suppl. video 4) with ffmpeg in a module.

   module load ceuadmin/ffmpeg
   ffmpeg -i jumper21s4.mp4 -ss 8 -t 8 s4.mp4
   ffmpeg -i s4.mp4 -f gif s4.gif
   ffprobe s4.gif
   ffmpeg -i s4.gif -s 640x360 CASP14-t1091.gif
   ffmpeg -i CASP14-t1091.gif -vf "drawtext=fontsize=20:text='CASP14-t1091':fontcolor=red:x=25:y=30" CASP14-t1091-text.gif
   

   Additional information is available from "Critical Assessment of protein Structure Prediction (CASP)", https://predictioncenter.org/casp14/

   See also Lin, Z., et al. (2023). Evolutionary-scale prediction of atomic-level protein structure with a language model. Science (New York, N.Y.) 379(6637): 1123-1130, https://doi.org/10.1126/science.ade2574. ↩