Check benchmarks on CI (#96)

* remove benchmark tests * add benchmark check after tests * recover codecov token * add a separate benchmarks checking job * fix missing dependencies
brainglobe · May 1, 2024 · e175ec8 · e175ec8
1 parent 62a61b1
commit e175ec8
Show file tree

Hide file tree

Showing 3 changed files with 17 additions and 100 deletions.
diff --git a/.github/workflows/test_and_deploy.yml b/.github/workflows/test_and_deploy.yml
@@ -78,6 +78,23 @@ jobs:
           python-version: ${{ matrix.python-version }}
           secret-codecov-token: ${{ secrets.CODECOV_TOKEN }}
 
+  benchmarks:
+    name: Check benchmarks
+    runs-on: ubuntu-latest
+    steps:
+      - uses: actions/checkout@v4
+      - uses: actions/setup-python@v5
+        with:
+          python-version: "3.10"
+      - name: Install dependencies
+        shell: bash
+        run: |
+          python -mpip install --upgrade pip
+          python -mpip install .[asv_version]
+      - name: Run asv check
+        shell: bash
+        run: asv check -v -E existing
+
   build_sdist_wheels:
     name: Build source distribution
     needs: [test]

diff --git a/tests/benchmarks/__init__.py b/tests/benchmarks/__init__.py
diff --git a/tests/benchmarks/test_cellfinder.py b/tests/benchmarks/test_cellfinder.py