PuckerLab website: Pucker lab website at TU Braunschweig
Material used in this course can be found here.
Material used in this course can be found here. Scripts and instructions of the bioinformatics component are available here.
Material used in this course can be found here. Scripts and instructions of the bioinformatics component are available here.
Material used in this course can be found here.
Material used in this course can be found here.
Material used in this course can be found here.
Material used in this course can be found here.
PuckerLab is hosting the TU Braunschweig iGEM team 2023.
PuckerLab hosted the TU Braunschweig iGEM team 2022.
The intention of this course is to enable life scientists with different backgrounds to solve their own data analysis issues by writing Python scripts for the automatic processing. Evaluation results of this course are discussed here. All materials are available for re-use (CC-BY 4.0).
Applied Python Programming for Life Scientists - github repository
This course provides an overview of bioinformatic methods frequently used in genome research. Participants run all analysis on real data sets. Evaluation results of this course are discussed here. All materials are available for re-use (CC-BY 4.0).
Applied Genome Research - github repository
This course provides an overview of molecular biology methods frequently used in genome research. Participants run all analysis on real data sets. Each participant is performing a different experiment. Evaluation results of this course are discussed here. All materials are available for re-use (CC-BY 4.0).
Molecular Methods in Genome Research - github repository
iGEM is the biggest synthetic biology competition for students. Teams from Bielefeld are participating since 2010. Detailed information about iGEM at the Center for Biotechnology (CeBiTec) at Bielefeld University is available here:
In 2017, I received the Bielefelder Certificate in Higher Education. Details are available here (in German). A description of my teaching project is available here (in German).
A fellowship provided by the Stifterverband supported the development of a digital lab book for practical courses in the life sciences. 'Molecular Methods in Genome Research' was implemented as part of this fellowship. A detailed project description can be found here (in German).
Friedrich, A., & Pucker, B. (2018). Peer-review as a teaching method. Working Paper der AG Forschendes Lernen in der dghd, 2, 2018. Carl von Ossietzky Universität Oldenburg.PDF
Pucker, B. Schilbert, H.M., Schumacher, S.F. (2019). Integrating Molecular Biology and Bioinformatics Education. Journal of Integrative Bioinformatics. doi:10.1515/jib-2019-0005.
Pucker, B., Holtgräwe, D., Rosleff Sörensen, T., Stracke, R., Viehöver, P., and Weisshaar, B. (2016). A de novo Genome Sequence Assembly of the Arabidopsis thaliana Accession Niederzenz-1 Displays Presence/Absence Variation and Strong Synteny. PloS-ONE 11:e0164321. doi:10.1371/journal.pone.0164321.
Haak, M., Vinke, S., Keller, W., Droste, J., Rückert, C., Kalinowski, J., & Pucker, B. (2018). High Quality de novo Transcriptome Assembly of Croton tiglium. Frontiers in Molecular Biosciences, 5. doi:10.3389/fmolb.2018.00062.