Pinned

1. Overview Overview Public

   Overview of repositories associated with @bpucker & @PuckerLab. This covers science communication projects, the developed bioinformatics tools, teaching activities, and project specific repositories.

   1

2. MYB_annotator MYB_annotator Public

   This tool performs an automatic identification, annotation, and analysis of the MYB gene family in plants. It can be applied to new transcriptome of genome assemblies.

   Python 16 5

3. MGSE MGSE Public

   Mapping-based Genome Size Estimation (MGSE) performs an estimation of a genome size based on a read mapping to an existing genome sequence assembly.

   Python 28 3

4. KIPEs KIPEs Public

   Knowledge-based Identification of Pathway Enzymes (KIPEs) performs an automatic annotation of the flavonoid biosynthesis steps in a new transcriptome of genome sequence assembly.

   Python 10 4

5. teaching teaching Public

   This repository gives an overview of my teaching activities. Links to slides and data sets are included. Feel free to re-use my content.

   40 8

6. PBBtools PBBtools Public

   collection of mini tools for the BioinfToolServer

   Python 1 1