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58 Open 114 Closed
58 Open 114 Closed
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Issues list

ValueError: zero-size array to reduction operation maximum which has no identity when running embed_data
#200 opened May 13, 2024 by jmrussell
TypeError: ~ (operator.invert) is only implemented on integer and Boolean-type tensors
#199 opened May 13, 2024 by LiXiaoli921
scGPT must be need GPU?
#198 opened May 10, 2024 by honghh2018
Fine-tuning for cell type annotation
#197 opened May 8, 2024 by tjeng
Allowing to specify 'span' parameter in the Preprocessor enhancement New feature or request
#196 opened May 7, 2024 by Szym29
1
Gene expression generation without cell embedding
#192 opened Apr 29, 2024 by cecileherbermann
1
Ask about the fine-tune dataset pbmc_10k and related error in finetune_integration.py
#191 opened Apr 26, 2024 by geshuang307
1
atac pretrain
#187 opened Apr 21, 2024 by GlancerZ
Question about the value of cls token
#186 opened Apr 21, 2024 by SELECT-FROM
annotation of brain cells using pretrained brain model enhancement New feature or request
#185 opened Apr 19, 2024 by surPoudel
1
What's the specific meaning of "condition tokens"?
#183 opened Apr 19, 2024 by OrangeKKW
NameError: name 'FlashMHA' is not defined
#182 opened Apr 16, 2024 by lamasJose
3
The defination of high prediction confidence?
#181 opened Apr 15, 2024 by Lvxiang713
2
Is it possible to run the multiomics tutorial without flash attention?
#178 opened Apr 9, 2024 by lamasJose
Pretrain with in-house data and cell embedding
#177 opened Apr 9, 2024 by ShellyCoder
Expanding scGPT Predictions to Additional Genes Beyond Tutorial Examples
#176 opened Apr 4, 2024 by KristinTsui
Pretrain with scATAC data
#175 opened Mar 30, 2024 by WhenMelancholy
parameters used in cell type annotation tutorial
#174 opened Mar 28, 2024 by yueming-ding
Loading model state dict error when loading recommended human pretrained.
#173 opened Mar 27, 2024 by Yonggie
4
Error in evaluate function in Tutorial_Perturbation.ipynb
#172 opened Mar 27, 2024 by Yonggie
2
mre is increasing while mse is decreasing
#171 opened Mar 25, 2024 by WhenMelancholy
1
GPT Usage
#170 opened Mar 25, 2024 by kocemir
what's meaning of "prediction confidence"？
#169 opened Mar 25, 2024 by BohanSi
Runtime error while running the perturbation analysis finetuning code
#167 opened Mar 22, 2024 by kpahwa16
How to perform perturbation prediction with 10X tissue dataset? enhancement New feature or request
#165 opened Mar 17, 2024 by Junjie-Hu
3
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