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Scalable Cytometry Image Processing

Belgium
maxim.lippeveld@ugent.be

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SCIP SCIP Public

Scalable Cytometry Image Processing (SCIP) is an open-source tool that implements an image processing pipeline on top of Dask, a distributed computing framework written in Python. SCIP performs pro…

Python 7
benchmark benchmark Public

Benchmark code for SCIP

Jupyter Notebook
SCIP-use-case-workflows SCIP-use-case-workflows Public

Snakemake workflows for SCIP use cases.

Jupyter Notebook

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Showing 7 of 7 repositories

SCIP Public
Scalable Cytometry Image Processing (SCIP) is an open-source tool that implements an image processing pipeline on top of Dask, a distributed computing framework written in Python. SCIP performs projection, illumination correction, image segmentation and masking, and feature extraction.

Python 7 GPL-3.0 0 13 0 Updated May 22, 2024
SCIP-use-case-workflows Public
Snakemake workflows for SCIP use cases.

Jupyter Notebook 0 Apache-2.0 0 0 0 Updated Mar 16, 2023
benchmark Public
Benchmark code for SCIP

Jupyter Notebook 0 0 0 0 Updated Jul 12, 2022
dask Public Forked from dask/dask
Parallel computing with task scheduling

Python 0 BSD-3-Clause 1,704 0 0 Updated Jul 7, 2022
dask-mpi Public Forked from dask/dask-mpi
Deploy Dask using MPI4Py

Python 0 BSD-3-Clause 29 0 0 Updated Jul 4, 2022
distributed Public Forked from dask/distributed
A distributed task scheduler for Dask

Python 0 BSD-3-Clause 719 0 0 Updated Nov 22, 2021
dask-jobqueue Public Forked from dask/dask-jobqueue
Deploy Dask on job schedulers like PBS, SLURM, and SGE

Python 0 138 0 0 Updated Sep 2, 2021

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