LFPy-2.3.2

What's Changed

• Fixed readthedocs build
• Fixed DeprecationWarning and other minor issues

Full Changelog: v2.3.1...v2.3.2

LFPy-2.3.1

What's Changed

• NEURON is pip installable for Python 3.11 by @espenhgn in #442
• Method for calculating membrane currents from membrane potentials by @torbjone in #446
• Ebrains mirror by @torbjone in #447
• Update README.md by @torbjone in #451
• Documentation fixes by @torbjone in #455

Full Changelog: v2.3...v2.3.1

LFPy-2.3

What's Changed

• Python 3.7-3.10; updated citation by @espenhgn in #407
• Update tests for LFPykit@master, bump version to 2.3.dev, by @espenhgn in #408
• Minor example fixes by @espenhgn in #409
• Fix Network MPI issue by @espenhgn in #411
• Fix crash with Neuron 8.1; improved Cell.get_idx_parent_children method by @espenhgn in #415
• set Cell.arc3d if pt3d==True by @espenhgn in #419
• New LFPy logo, some docstring fixes by @espenhgn in #421
• removed deprecated MEG class by @espenhgn in #422
• fixed set*_recorders use of dt by @espenhgn in #425
• runtime compile of NMODL files by @espenhgn in #427
• never close stale issues/PRs by @espenhgn in #432
• Get rid of package dependency on mpi4py by @espenhgn in #433
• faster InfiniteHomogeneousVolCondMEG.calculate_H_from_iaxial method by @espenhgn in #437
• Prep LFPy-2.3 release by @espenhgn in #439
• bump LFPy-2.3rc0 -> 2.3 by @espenhgn in #441

Full Changelog: v2.2.5...v2.3

LFPy-2.3rc0

What's Changed

• Python 3.7-3.10; updated citation by @espenhgn in #407
• Update tests for LFPykit@master, bump version to 2.3.dev, by @espenhgn in #408
• Minor example fixes by @espenhgn in #409
• Fix Network MPI issue by @espenhgn in #411
• Fix crash with Neuron 8.1; improved Cell.get_idx_parent_children method by @espenhgn in #415
• set Cell.arc3d if pt3d==True by @espenhgn in #419
• New LFPy logo, some docstring fixes by @espenhgn in #421
• removed deprecated MEG class by @espenhgn in #422
• fixed set*_recorders use of dt by @espenhgn in #425
• runtime compile of NMODL files by @espenhgn in #427
• never close stale issues/PRs by @espenhgn in #432
• Get rid of package dependency on mpi4py by @espenhgn in #433
• faster InfiniteHomogeneousVolCondMEG.calculate_H_from_iaxial method by @espenhgn in #437
• Prep LFPy-2.3 release by @espenhgn in #439

Full Changelog: v2.2.5...v2.3rc0

LFPy-2.2.6

Release notes

This is the 6th maintenance release for LFPy-2.2

What's Changed

• Python 3.7-3.10; updated citation by @espenhgn in #407
• fix Neuron 8.1 issue, version bump by @espenhgn in #417

Full Changelog: v2.2.5...v2.2.6

LFPy-2.2.5

Release notes

This is the 5th maintenance release for LFPy-2.2. This version expects LFPykit>=0.4,<0.5

What's Changed

• Replace Lintly action by @espenhgn in #399
• fix download of Hay2011 model codes by @espenhgn in #403
• bump version to 2.2.5 by @espenhgn in #405

Full Changelog: v2.2.4...v2.2.5

LFPy-2.2.4

Release notes

This is the 4th maintenance release for LFPy-2.2.

What's Changed

• Implementation of Network.enable_extracellular_stimulation() by @Alexis-Melot in #373
• Updated Dockerfile, pinning versions, linting by @espenhgn in #376
• add CITATION.cff file by @espenhgn in #377
• Update CITATION.cff by @espenhgn in #379
• fix MEG.calculate_H_from_iaxial method and docstring by @espenhgn in #381
• add py=3.10 to build matrix by @espenhgn in #382
• Incorporate InfiniteHomogeneousVolCondMEG and SphericallySymmetricVolCondMEG by @espenhgn in #383
• remove NSG example files by @espenhgn in #384
• Remove mazzoni example files by @espenhgn in #385
• remove use of .rot files by @espenhgn in #387
• Require LFPykit>=0.4 by @espenhgn in #390
• %pylab inline no longer an option by @espenhgn in #391
• fix test function by @espenhgn in #395
• use st.truncnorm for delays and multapses. formatting by @espenhgn in #392
• bump version to 2.2.4 by @espenhgn in #393

New Contributors

• @Alexis-Melot made their first contribution in #373

Full Changelog: v2.2.3...v2.2.4

LFPy-2.2.3

Release notes

This is the 3rd maintenance release for LFPy-2.2.

What's Changed

• add support for scipy.stats.rv_continuous and rv_discrete delayfun by @espenhgn in #356
• Fix readthedocs builds by @espenhgn in #361
• modified Dockerfile for Singularity on JUSUF by @espenhgn in #362
• filter warnings for existing sections with networks by @espenhgn in #365
• Some minor fixes to example scripts by @espenhgn in #369
• bump version to 2.2.3 by @espenhgn in #371

Full Changelog: v2.2.2...v2.2.3

LFPy-2.2.2

Release notes

This is the 2nd maintenance release for LFPy-2.2.

Changesets

This bugfix release contains the following changesets since https://github.com/LFPy/LFPy/releases/tag/v2.2:
5986b4f (HEAD -> master, tag: v2.2.2, origin/master, origin/HEAD) bump version to 2.2.2 (#351)
8c92ac2 lintly must be happy
ea6d09b updated Dockerfile recipe (#349)
5f2b8db add platform aarch64 (#347)
5ca29ad Add missing length attribute to DummyCell class (#344)
6a6d7d3 Fix DeprecationWarning w. neuron.run() (#336)
e2019bc Remove mocked packages mpi4py and neuron (#334)
14a9ab7 formatting
b38146f Better support for platform osx-arm64 (#329)
23449af remove MEAutility from dependencies (#327)
669967e (tag: v2.2.1) prep 2.2.1 release (#324)
9eb9fba fixed gathering of somavs if number of cells < MPI::Size (#323)
aa0a3ba pick random connections using np.random.binomial (#321)
b49e726 Fix 315 317 (#320)
6d77e21 fix DeprecationWarnings (#314)
3812f63 fix for h5py < 3 (#313)
f419c92 pass weightFunction to network.connect (#309)
78634c4 custom_fun(cell) must be assumed (#308)
977b507 convert __create_sectionlists method to protected (#307)
7aaf9df Update README.md

LFPy-2.2.1

Release notes

This is the first maintenance release for LFPy-2.2.

Changesets

This bugfix release contains the following changesets since https://github.com/LFPy/LFPy/releases/tag/v2.2:
669967e (HEAD -> master, tag: v2.2.1, origin/master, origin/HEAD) prep 2.2.1 release (#324)
9eb9fba fixed gathering of somavs if number of cells < MPI::Size (#323)
aa0a3ba pick random connections using np.random.binomial (#321)
b49e726 Fix 315 317 (#320)
6d77e21 fix DeprecationWarnings (#314)
3812f63 fix for h5py < 3 (#313)
f419c92 pass weightFunction to network.connect (#309)
78634c4 custom_fun(cell) must be assumed (#308)
977b507 convert __create_sectionlists method to protected (#307)
7aaf9df Update README.md