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Updated README.md for V1.7.1
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AndrewCRMartin committed Sep 24, 2015
1 parent 8d1ec86 commit 0d25175
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2 changes: 1 addition & 1 deletion JSAV.js
Expand Up @@ -134,7 +134,7 @@ Where 'mySeqDisplay' is the name of a div that will be created
@property {bool} options.toggleDotify - Create a check box for toggling dotify
@property {string} options.toggleDotifyLabel - Label for dotify checkbox toggle
@property {bool} options.toggleNocolour - Create a check box for toggling nocolour
@property {string} options.toggleNocolourLabel - Label for nocolout checkbox toggle
@property {string} options.toggleNocolourLabel - Label for nocolour checkbox toggle
@property {bool} options.fasta - Create a FASTA export button
@property {string} options.fastaLabel - Label for FASTA export button
@property {bool} options.consensus - Display consensus sequence
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9 changes: 7 additions & 2 deletions README.md
@@ -1,5 +1,5 @@
JavaScript Sequence Alignment Viewer (JSAV) V1.6
================================================
JavaScript Sequence Alignment Viewer (JSAV) V1.7.1
==================================================

JSAV is a simple JavaScript sequence alignment viewer

Expand All @@ -23,17 +23,22 @@ The options for controlling the display are:
and the actualy slider height is relative to this (default: '6pt')
- `selectable` - Should selection checkboxes be displayed for each sequence
- `deletable` - Makes it possible to delete sequences
- `deleteLabel` - Label for the delete button
- `highlight` - Array of ranges to highlight (e.g. [24,34,50,56] would highlight
positions 24-34 and 50-56)
- `submit` - URL for submitting selected sequences
- `submitLabel` - Label for submit button
- `idSubmit` - URL for submitting a single sequence where its id/label has been clicked
- `idSubmitClean` - Remove non-alpha characters from sequence before submitting
- `action` - Function to call using selected sequences - the function will be passed
the divId and array of sequence objects
- `actionLabel` - Label for action button
- `dotify` - Repeated residues in the alignment are replaced with dots
- `nocolour` or `nocolor` - Repeated residues are not coloured
- `toggleDotify` - Display a checkbox to toggle the dotify mode
- `toggleDotifyLabel` - Label for dotify checkbox toggle
- `toggleNocolour` or `toggleNocolor` - Display a checkbox to toggle the nocolour-dotify mode
- `toggleNocolourLabel` or `toggleNocolorLabel` - Label for nocolour checkbox toggle
- `fasta` - Create a FASTA export button
- `fastaLabel` - Label for FASTA export button
- `consensus` - Display consensus sequence
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