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@sourmash-bio

sourmash, for large-scale biological sequence search!

Quickly search, compare, and analyze genomic and metagenomic data sets.

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  1. sourmash sourmash Public

    Quickly search, compare, and analyze genomic and metagenomic data sets.

    Python 443 78

  2. branchwater branchwater Public

    Searching large collections of sequencing data with genome-scale queries

    HTML 6 2

  3. wort wort Public

    A database for signatures of public genomic sources

    Python 17 2

  4. sourmash_plugin_branchwater sourmash_plugin_branchwater Public

    fast, multithreaded sourmash operations: search, compare, and gather.

    Python 13 2

  5. database-examples database-examples Public

    Example workflows and useful scripts for building your own sourmash databases

    Python 2

  6. sourmash-mixers sourmash-mixers Public

    A meta-package to install a number of sourmash plugins!

    4

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