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69 Open 157 Closed
69 Open 157 Closed
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Issues list

Use vecdist for r binning instead of manually doing math
#279 opened Mar 1, 2024 by JesseSandberg
pbc wrap not changing coordinates
#277 opened Feb 27, 2024 by JesseSandberg
vecexpr and qwrap are inextricable from testing testing_proc_needed This issue represents a testing proc that needs to be created and implemented
#275 opened Feb 21, 2024 by JesseSandberg
Known issues with pbctools
#271 opened Feb 19, 2024 by JesseSandberg
order params pass lists of length 1 to concatenateList in unit tests
#263 opened Jan 22, 2024 by JesseSandberg
Check how beta and occupancy values are filled for avg pdb in cartesian mode bug Something isn't working low_priority
#258 opened Jan 17, 2024 by JesseSandberg
normal vectors are untested testing_proc_needed This issue represents a testing proc that needs to be created and implemented
#257 opened Jan 4, 2024 by JesseSandberg
Order parameters need sanity checking built-in testing_proc_needed This issue represents a testing proc that needs to be created and implemented
#256 opened Jan 3, 2024 by JesseSandberg
Density needs to be re-assessed density-related_issue This issue is related to the unimplemented density feature
#255 opened Jan 3, 2024 by JesseSandberg
Review the TCL unit tests testing_proc_needed This issue represents a testing proc that needs to be created and implemented
#249 opened Jan 3, 2024 by JesseSandberg
@JesseSandberg
outputDensityNormInfo does not account for leaflet number asymmetry density-related_issue This issue is related to the unimplemented density feature enhancement New feature or request
#248 opened Jan 2, 2024 by JesseSandberg
qwrap and vecexpr are hard to compile on a mac
#233 opened Nov 22, 2023 by JesseSandberg
Unclear orientation of protein density-related_issue This issue is related to the unimplemented density feature
#232 opened Nov 22, 2023 by EzryStIago
1
"dict get $config_dict X" is hard to read good first issue Good for newcomers housekeeping
#231 opened Nov 22, 2023 by EzryStIago
1
"Densities" are no longer densities, but counts bug Something isn't working density-related_issue This issue is related to the unimplemented density feature
#230 opened Nov 22, 2023 by EzryStIago
@JesseSandberg
2
Cell-prep and run_nougat are very verbose - quiet mode would be nice
#229 opened Nov 20, 2023 by EzryStIago
1
Leaflet sorter shouldn't run so often enhancement New feature or request
#228 opened Nov 20, 2023 by EzryStIago
Documentation bug Something isn't working documentation Improvements or additions to documentation
#225 opened Nov 20, 2023 by EzryStIago
7 tasks
@JesseSandberg
Locations of qwrap and vecexpr enhancement New feature or request
#224 opened Nov 20, 2023 by EzryStIago
1
Nougat.py cannot read in multiple headgroup names
#223 opened Nov 15, 2023 by JahmalEnnis
Nougat needs flags to for calculation of height, density, order, or tilt enhancement New feature or request
#222 opened Nov 14, 2023 by JahmalEnnis
lsq norm factor proc needs to be able to handle more than 1 lipid type bug Something isn't working density-related_issue This issue is related to the unimplemented density feature
#221 opened Nov 14, 2023 by JahmalEnnis Multiple lipids in one system
save_areas doesn't account for variable area of cartesian bins bug Something isn't working density-related_issue This issue is related to the unimplemented density feature
#213 opened Nov 10, 2023 by JesseSandberg
Make nougat package
#212 opened Nov 10, 2023 by EzryStIago
@EzryStIago
1
fix beadname convention in Make_surface_PDB bug Something isn't working low_priority
#211 opened Nov 1, 2023 by JesseSandberg
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