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Segvis: A package for visualization of high throughout sequencing data along genomic segments

This is an R package which attemps to automatize some tasks related to the visualization of aligned read data.

Segvis provides different tools to summarize and visualize data:

  • Extract read data of specified input regions

  • Plot peaks of different conditions across the same set of regions

  • Plot central measures for a set of regions with the same width

  • Subset regions according to used defined annotations

  • Plot the heatmap of signal curves accross regions separated by annotation

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Package to visualize next generation sequencing data along genomic regions

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