Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

Updated psi-cd-hit-local.pl #92

Open
wants to merge 1 commit into
base: master
Choose a base branch
from
Open

Conversation

tkiryuti
Copy link

Updated "psi-cd-hit-local.pl" from release V4.8.1 (from Feb 28, 2019).
Line 1198: "qsub" requires a "-v" flag to pass "$j" to the qsub job
Line 1200: the error message also displays the captured qsub id
Line 1351: causes the "$remote_sh_script" to now have "para=${para:-$1}", so if $para is empty or undefined, then $1 is used
Line 1454: "qstat" now has "-x" for XML output. It no longer has an "-xml" option.

Updated "psi-cd-hit-local.pl" from release V4.8.1 (from Feb 28, 2019).
Line 1198: "qsub" requires a "-v" flag to pass "$j" to the qsub job
Line 1200: the error message also displays the captured qsub id
Line 1351: causes the "$remote_sh_script" to now have "para=${para:-$1}", so if $para is empty or undefined, then $1 is used
Line 1454: "qstat" now has "-x" for XML output. It no longer has an "-xml" option.
Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment
Labels
None yet
Projects
None yet
Development

Successfully merging this pull request may close these issues.

None yet

1 participant