update splitAssays example to match TCGAsplitAssays

waldronlab · Aug 11, 2023 · 62b3478 · 62b3478
1 parent befac2c
commit 62b3478
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diff --git a/R/MultiAssayExperiment-helpers.R b/R/MultiAssayExperiment-helpers.R
@@ -838,14 +838,15 @@ setMethod("splitAssays", "MultiAssayExperiment",
 #' @examples
 #'
 #' patts <- list(
-#'     normals = "TCGA-OR-[A-Z0-9]{4}-11",
-#'     tumors = "TCGA-OR-[A-Z0-9]{4}-01"
+#'     normals = "TCGA-[A-Z0-9]{2}-[A-Z0-9]{4}-11",
+#'     tumors = "TCGA-[A-Z0-9]{2}-[A-Z0-9]{4}-01"
 #' )
 #'
 #' data("miniACC")
 #'
 #' hits <- makeHitList(miniACC, patts)
 #'
+#' ## only turmors present
 #' splitAssays(miniACC, hits)
 #'
 #' @export

diff --git a/man/MultiAssayExperiment-helpers.Rd b/man/MultiAssayExperiment-helpers.Rd