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https://bugsigdb.org/Special:SpecialPages - all special pages
https://bugsigdb.org/Special:CreateAccount - create account
https://bugsigdb.org/Special:ListUsers - list users and roles
https://bugsigdb.org/Special:UserRights - change roles for one of the above users (requires knowing user name, can be found above).
https://bugsigdb.org/Special:Log/delete - deletion log
https://bugsigdb.org/Help:Cleanup - This page assists editors with cleanup of certain outstanding wiki issues. It has lots of heavy queries so it may take a while to load or purge.
Edit auto-complete fields: https://bugsigdb.org/Help:Admin
bulk export: https://bugsigdb.org/Help:Export
API Sandbox: https://bugsigdb.org/Special:ApiSandbox

Microbe Directory web site, data source on GitHub (has sql, csv, and json), and publication. Uses MetaPhlan2 names, need to map to NCBI taxID. There is a recent update (Microbe Directory 2): see preprint and github repo.
Microbial fatty acid compositions, provides two csv files using NCBI taxID.
Microbial Life Database - site is mostly broken, sent request for annotation data (Levi, March 26)
Microbe Wiki (MediaWiki site). See its taxonomy index - does not seem to be semantic, so I'm not sure there's anything we can use in bulk download.
PATRIC has a huge amount of information derived from genome analysis, such as metabolic products, metabolic pathways, and "specialty genes". For example, pathways associated with Fusobacterium nucleatum. Something to think about the feasibility of importing down the road. Organized by NCBI taxID.
Ludwig's curation efforts and README, some of which are listed above.