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Issues: vitessce/vitessce-python

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#92 by ilan-gold was closed Sep 27, 2021
Closed
Failed to load model class "Anymodel"
#305 by CReihsmann was closed Nov 8, 2023
Closed 2
Support SpatialData
#286 opened Jan 31, 2023 by keller-mark
Open 3
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Issues list

Helper function to use adata.uns[obs_set_col + "_colors"] for initial obs set colors feature New feature or request
#340 opened Apr 29, 2024 by keller-mark
Setting colors for obsSets?
#339 opened Apr 26, 2024 by srivarra
3
Support using JSX for writing plugin views feature New feature or request
#334 opened Apr 14, 2024 by keller-mark
1
Support automatic instantiation of Wrapper objects feature New feature or request
#331 opened Apr 2, 2024 by keller-mark
2
Add option for widget to communicate directly with Zarr store (no local HTTP server) feature New feature or request
#322 opened Feb 24, 2024 by keller-mark
1
Additional improvements to adata_to_multivec_zarr function
#320 opened Feb 9, 2024 by keller-mark
ValueError: data too large for non-BigTIFF file
#318 opened Jan 26, 2024 by J-Yash
4
Adding scale bar to spatial view image
#311 opened Jan 15, 2024 by J-Yash
Minimal example for obsSegmentations.json for visualizing polygons in Spatial View
#310 opened Jan 11, 2024 by J-Yash
2
Convert spatialdata-plot plotting tree to Vitessce config feature New feature or request
#298 opened Sep 21, 2023 by keller-mark
Demos for SquidPy example datasets data_utils demo
#297 opened Sep 19, 2023 by keller-mark
Snakemake pipeline for 10x Genomics Multiome outputs data_utils
#296 opened Sep 18, 2023 by keller-mark
Convert flattened multi-level coordination JSON back to nested dict for to_python cell-atlas feature New feature or request
#294 opened Sep 12, 2023 by keller-mark
Support BiocPy SingleCellExperiment data_utils
#278 opened Aug 16, 2023 by keller-mark
Refactor data_utils and extras_require data_utils
#276 opened Aug 11, 2023 by keller-mark
1
1
Support uid field in VitessceConfig constructor cell-atlas feature New feature or request
#269 opened Aug 4, 2023 by keller-mark
Revert removal of data_type argument for VitessceConfigDatasetFile feature New feature or request
#265 opened Jul 26, 2023 by keller-mark
Figure out why omero metadata might be within multiscales[0] rather than at root level of .zattrs investigation
#257 opened Jul 7, 2023 by keller-mark
2
Figure out how to surface JS errors in Python feature New feature or request investigation
#256 opened Jul 7, 2023 by keller-mark
1
error with UJSONResponse with Starlette v0.28.0 possibly-outdated tech debt
#254 opened Jul 7, 2023 by keller-mark
1
Support emObject data_utils
#293 opened Jun 14, 2023 by keller-mark
Validate configs on python side using @vitessce/json-schema NPM package feature New feature or request
#249 opened Jun 9, 2023 by keller-mark
1
End-to-end test that rerunning .display or .widget in same cell does not crash browser devops
#247 opened Jun 7, 2023 by keller-mark
Spatial view coordinates flipped. investigation
#245 opened Jun 2, 2023 by lee-t
Support RDS files data_utils
#292 opened May 16, 2023 by keller-mark
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