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Pinned

  1. EBI-Metagenomics/nf-modules EBI-Metagenomics/nf-modules Public

    Microbiome Informatics NF modules and sufworkflows

    Nextflow 3

  2. nf-core/modules nf-core/modules Public

    Repository to host tool-specific module files for the Nextflow DSL2 community!

    Nextflow 256 629

  3. PavlopoulosLab/Arena3Dweb PavlopoulosLab/Arena3Dweb Public

    Interactive 3D visualization of multilayered networks.

    JavaScript 20 4

  4. PavlopoulosLab/Flame PavlopoulosLab/Flame Public

    Flame: A web tool for functional enrichment analysis using multiple gene lists

    R 7 4

  5. PathWalks_parallel PathWalks_parallel Public

    Multi-thread PathWalks based on number of input cores and total steps per walker.

    R

  6. PathWalks PathWalks Public

    PathWalks is a random walk based algorithm where a walker crosses a pathway-to-pathway network under the guidance of a disease-related map. The latter is a gene network that we construct by integra…

    R 5 3