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re-run notebooks for slides #71

re-run notebooks for slides

re-run notebooks for slides #71

Workflow file for this run

name: Test
on: push
jobs:
validate-notebooks:
name: Validate Notebooks
runs-on: ubuntu-latest
defaults:
run:
# Required for "run" commands to execute in the conda env.
shell: bash -l {0}
steps:
- name: Checkout Code
uses: actions/checkout@v3
- name: Set Up Conda Environment
uses: conda-incubator/setup-miniconda@v2
with:
activate-environment: uc-python
environment-file: environment.yml
- name: Set Up Jupyter Kernel
run: |
python -m ipykernel install --user --name uc-python
- name: Install Papermill
run: |
conda install papermill
- name: Prep notebooks
run: |
# Remove nb cells that should be skipped in CI.
for nb in notebooks/*.ipynb; do
python scripts/prep_nb_for_ci.py "$nb"
done
- name: Run notebooks
run: |
for nb in notebooks/*.ipynb; do
echo "running $nb"
output=$(papermill --cwd notebooks/ "$nb" -)
done