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@trenchproject

TRanslating ENvironmental CHange

We build computational and visualization tools to translate environmental change into organismal responses.

Pinned

  1. TrenchR TrenchR Public

    an R package for transparent environmental and ecological biophysics

    R 12 6

  2. Trench-IR Trench-IR Public

    Thermal image conversion, storage, and education resources to further understanding of how organisms experience their environment

    CSS 1

  3. TrenchRmodules TrenchRmodules Public

    Physical processes in ecosystems: Educational modules introducing biophysical ecology and use of the TrEnChR package.

    HTML

  4. R-Docker-Server R-Docker-Server Public template

    Assorted shell scripts and dockerfiles for a containerized RShiny/RStudio deployment strategy.

    Shell 1

  5. MicroclimMarkdown MicroclimMarkdown Public

    A users' guide to microclimate data for environmental and ecological biophysics. R Markdown text for a bookdown site with resources for accessing microclimate datasets. Within chapters correspondin…

    TeX

  6. RShiny_Microclim RShiny_Microclim Public

    An interactive shiny app that facilitates the selection of microclimate data by offering spatial and temporal data comparisons.

    HTML

Repositories

Showing 10 of 26 repositories
  • TrenchR Public

    an R package for transparent environmental and ecological biophysics

    R 12 6 2 0 Updated Sep 29, 2023
  • ESA_MechModelWorkshop Public

    Rmd files for ESA workshop on mechanistic niche modeling

    HTML 0 1 0 0 Updated Aug 6, 2023
  • TrenchRmanuscript Public

    Software note introducing TrenchR package

    HTML 0 0 1 0 Updated Aug 1, 2023
  • Insect__Climate_Change_Responses Public

    This repository contains data and scripts for the manuscript "Temperature sensitivity of fitness components across life cycles drives insect responses to climate change" and some extensions beyond the manuscript. This project was done by Chris Johnson in 2020-2023.

    R 0 1 0 0 Updated Jun 20, 2023
  • R-Docker-Server Public template

    Assorted shell scripts and dockerfiles for a containerized RShiny/RStudio deployment strategy.

    Shell 1 0 0 0 Updated Apr 3, 2023
  • RShiny_Microclim Public

    An interactive shiny app that facilitates the selection of microclimate data by offering spatial and temporal data comparisons.

    HTML 0 0 1 0 Updated Mar 2, 2023
  • trenchproject.github.io Public

    A notebook tracking the work of the TrEnCh Project.

    SCSS 0 MIT 0 0 4 Updated Oct 19, 2022
  • Trench-IR Public

    Thermal image conversion, storage, and education resources to further understanding of how organisms experience their environment

    CSS 1 0 4 0 Updated Mar 14, 2022
  • RShiny_Robomussels Public

    Rshiny_robomussels is an interactive shiny app that allows any user to visualize the operative temperatures of mussels on a microclimatic scale.

    R 0 0 0 0 Updated Feb 24, 2022
  • Climate-Change-Metabolism Public

    A Shiny visualization of Climate Change and its effect on the energy use of ectotherms.

    R 1 0 3 0 Updated Dec 10, 2021
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