FLAME: Full Length Adjecency Matrix Enumeration - is a module that allows for the analysis of ONT Nanopore RNA long-read sequencing data.
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Updated
Dec 13, 2021 - Python
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transcriptome-wide
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a scalable and faster implementation for the genome and the transcriptome annotations for large scale sequencing datasets.
genome-annotation
transcriptomics
trinity
genome-assembly
transcriptome-assembly
bacterial-genomes
plantgenomes
plantgenomics
transcriptome-annotation
bacterial-genome-analysis
transcriptome-profiling-data
transcriptome-wide
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Updated
May 2, 2024 - Python
a regular expression based trinity assembly transdecoder predictions encoder which will parse and will prepare the transcript annotations for visualization with any genome visualization kit such as pygenomeviz, mauve and others, it prepares the coordinates as tuples
genome-annotation
trinity
transcriptome-assembly
geneprediction
transcriptome-annotation
transcriptome-analysis
transcriptome-wide
-
Updated
May 2, 2024 - Python
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