The tutorial for performing association analysis of whole-genome/whole-exome sequencing (WGS/WES) studies using FAVORannotator, STAARpipeline and STAARpipelineSummary
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Updated
May 13, 2024 - R
The tutorial for performing association analysis of whole-genome/whole-exome sequencing (WGS/WES) studies using FAVORannotator, STAARpipeline and STAARpipelineSummary
PolyFun (POLYgenic FUNctionally-informed fine-mapping)
Statistical models for finding de novo recurrence and compound heterozygosity across rare disease patient cohorts
Genotype Representation Graph Library
Fast Inference of Biological Networks from Directed Regulations (Findr) in Julia
eXtensible Forward Time SIMulator for complex phenogenetic architectures
An app for performing association analysis of whole-genome/whole-exome sequencing (WGS/WES) studies using STAARpipeline in UK Biobank RAP
An R package for performing association analysis of whole-genome/whole-exome sequencing (WGS/WES) studies using STAARpipeline
An R package for summarizing and visualizing association analysis results of whole-genome/whole-exome sequencing (WGS/WES) studies generated by STAARpipeline
GAUDI: a penalized regression based PRS method designed specifically for admixed individuals
Multi-subject Single Cell Deconvolution
An R package for performing MetaSTAAR procedure in whole-genome sequencing studies
Performance Inflation and Perturbation Sensitivity of PGSs
An R package for performing STAAR procedure in whole-genome sequencing studies
A Python/R package for fitting linear mixed models for genome-wide association studies among related individuals
Adaptive Regularized Tri-factor non-negative matrix factorization for deConvolution
Use reference genetic map to interpolate genetic position for a query set of variants
An R package for performing MultiSTAAR procedure in whole-genome sequencing studies
Heritability, genetic correlation and functional enrichment estimation for case-control studies
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