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rna-velocity-estimation

Here are 5 public repositories matching this topic...

velocyto-team / velocyto.R

RNA velocity estimation in R

rna-velocity-estimation

Updated Sep 14, 2023
R

velocyto-team / velocyto.py

RNA velocity estimation in Python

rna-seq single-cell rna-velocity-estimation

Updated Aug 14, 2023
Python

pachterlab / kb_python

A wrapper for the kallisto | bustools workflow for single-cell RNA-seq pre-processing

scrna-seq kallisto single-cell-rna-seq rna-velocity-estimation bustools kb-python

Updated Jan 26, 2024
Python

GuangyuWangLab2021 / cellDancer

Predict RNA velocity through deep learning

transcriptomics single-cell-genomics single-cell-rna-seq rna-velocity-estimation rna-velocity cell-fate rna-splicing rna-splicing-analysis

Updated Dec 12, 2023
Jupyter Notebook

pyrovelocity

pinellolab / pyrovelocity

𝒫robabilistic modeling of RNA velocity ⬱

probabilistic-programming transcriptomics pyro probabilistic-models single-cell-genomics single-cell-rna-seq rna-velocity-estimation multiomics deep-generative-model developmental-trajectories rna-velocity rna-splicing single-cell-multiomics cell-fate-determination rna-splicing-analysis

Updated Apr 29, 2024
Python

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