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The codon project was created to increase code sharing, code consistency, coding standards, and encourage collaboration. Package documentation is available on the GitHub pages. codonPython aims to reduce the barrier for entry for analysis and provide software development experience for those at a higher level of technical ability.
An example Python repository that follows the standard structure we recommend for Reproducible Analytical Pipeline (RAP) scripts, with supporting packages in Python.
An example R repository that follows the standard structure we recommend for Reproducible Analytical Pipeline (RAP) scripts with supporting packages in R
This repo includes the pipeline used to link and curate CVD PREVENT audit data to HES and death registration data into two tables. These are subsequently sent to OHID for analysis and publication.