A workflow for assessing similarity between a set of plasmid sequences
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Updated
Jun 16, 2023 - Nextflow
A workflow for assessing similarity between a set of plasmid sequences
Different approaches to identify best practices for detection of AMR genes, including: total genomic DNA and plasmid DNA extractions, solo assembly of Illumina short-reads and of ONT long-reads, and two hybrid assembly pipelines
Bacterial plasmid annotation pipeline
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