Ontology for the description of human clinical features
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Updated
May 9, 2024 - Makefile
Ontology for the description of human clinical features
Information and scripts for the CropAndWeed Dataset
Plant Phenotyping APP
Self-Supervised Vision Transformers for multiplexed imaging datasets
Digital Imaging of Root Traits: Extract trait measurements from images of monocot and dicot roots.
3-Demeter Capture is a tool for building 3-D point clouds from images
Minimum Information About a Plant Phenotyping Experiment
Internationalisation of the HPO content
Standard terms for annotating mammalian phenotypic data
Sentinel-2 Crop Trait Retrieval Using Physiological and Phenological Priors from Field Phenotyping (Graf et al., 2023, RSE)
HistoJS: Web-Based Analytical Tool for Multiplexed Images. Limited Github Online Demo 👇
Web-interface to the Biofuel Ecophysiological Traits and Yields Database (used by PEcAn and TERRA REF)
Implementation of the 3D reconstruction pipeline optimized for plant branching structures.
PhenoSV: Interpretable phenotype-aware model for the prioritization of genes affected by structural variants.
Monitor and analyze plant growth conditions by computing geometric and color traits from any top-view image dataset
A python package for agricultural phenotypic trait extraction from 2D image sets via 3D reconstruction and analysis of 3D point clouds.
Software program for generating synthetic datasets for genotypes and phenotypes
Scanomatic
An imaging library to detect and track future position of ears on maize plants
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