omero
Here are 153 public repositories matching this topic...
A .NET library & program for annotating, & editing various microscopy imaging formats using Bioformats supported images. including whole slide, pyramidal & series.
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Jan 13, 2023 - C#
Use OMERO to authenticate with JupyterHub
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Jan 10, 2020 - Python
Docker image for pixel-buffer OMERO microservice
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Aug 25, 2017 - Shell
OMERO PyFilesystem2 implementation
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Jan 10, 2020 - Python
This repository contains software that was developed for the management of bioimage data generated at UMass Chan Medical School and as part of the Canada Bioimaging RDM initiative.
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May 10, 2024 - Python
Plot IDR release stats
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Jan 20, 2021 - Jupyter Notebook
OMERO.web script to convert grey scale label images into OMERO Rois
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Apr 10, 2024 - Python
Scripts for use with BIOMERO
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May 13, 2024 - Python
MATLAB scripts used for photoactivation analysis in Young et. al 2014
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Apr 4, 2019 - MATLAB
OMERO server external configuration plugin
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Jan 19, 2021 - Python
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Jun 8, 2021 - Jupyter Notebook
Python code that I used in my blog posts on the Zarr file format.
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Oct 24, 2022 - Python
Automatically generating bounding boxes for OMERO slidescans
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Dec 10, 2020 - Python
Repo for generating OMERO reports/dashboards
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Sep 30, 2021 - Python
This repository contains software that was developed to add metadata annotations to bioimage data before importing it into OMERO
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May 9, 2024 - Python
OMERO.web app for adding short URLs to OMERO.web
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Oct 2, 2018 - Python
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