Discovering known and novel miRNAs from small RNA sequencing data
-
Updated
Nov 23, 2023 - Perl
Discovering known and novel miRNAs from small RNA sequencing data
command lines tool to annotate miRNAs with a standard mirna/isomir naming
small rna-seq analysis package
circRNA quantification, differential expression analysis and miRNA target prediction of RNA-Seq data
Small non-coding RNA annotation Pipeline Optimized for rRNA- and tRNA-Derived Small RNAs
isomiR quantification and analysis pipeline
miARma-seq: a comprehensive tool for miRNA, mRNA and circRNA analysis
This script implements a Selenium WebDriver to automate the access to miRDB - MicroRNA Target Prediction and Functional Study Database and search for microRNAs targets/seeds present in custom mRNA sequences.
BioSeq2vec: learning deep representation of biological sequences using LSTM Encoder-Decoder
A software to detect genome-wide miRNA-gene enrichment signal.
MirMachine, a command line tool to detect microRNA homologs in genome sequences.
Using RNA-Seq data to improve microRNA target prediction accuracy in animals
OmicSelector - Environment, docker-based application and R package for biomarker signiture selection (feature selection) & deep learning diagnostic tool development from high-throughput high-throughput omics experiments and other multidimensional datasets. Initially developed for miRNA-seq, RNA-seq and qPCR.
Small RNAseq pipeline for paired-end reads
miRNA Discovery Project : simple, easy-to-use, rule-based miRNA candidate discovery with multithread acceleration
Add a description, image, and links to the mirna topic page so that developers can more easily learn about it.
To associate your repository with the mirna topic, visit your repo's landing page and select "manage topics."