Master Equation vs Montecarlo for simulating Single Electron Transistor behavior in MATLAB
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Apr 10, 2021 - MATLAB
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master-equation
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Quantum Master Equation Tutorial
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Jan 26, 2024 - Python
Markovian-dynamics is a Python package built to simplify dynamics calculations in thermodynamic systems.
physics
thermodynamics
non-equilibrium
master-equation
markovian-dynamics
rate-matrix
detailed-balance
arrhenius-process
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Apr 13, 2019 - Python
A Jupyter notebook reproducing the results of "Nonlinear response of the vacuum Rabi resonance"
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May 15, 2018 - Jupyter Notebook
Julia package to simulate stochastic processes.
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Aug 26, 2020 - Julia
Project for Physical Methods of Biology based on Kim JK, Tyson JJ (2020) Misuse of the Michaelis–Menten rate law for protein interaction networks and its remedy. PLoS Comput Biol 16(10): e1008258. https://doi.org/10.1371/journal. pcbi.1008258.
switch
ode
differential-equations
gillespie
cme
michaelis-menten
master-equation
stochastic-chemical-kinetics
qssa
tqssa
physical-methods-of-biology
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Nov 13, 2023 - C++
Bayesian inference of stochastic cellular processes with and without memory in Python.
python
markov-model
statistical-inference
model-selection
biological-data-analysis
dynamical-systems
parameter-estimation
bayesian-inference
nested-sampling
stochastic-processes
probabilistic-models
gillespie-algorithm
stochastic-models
master-equation
biological-modeling
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Nov 15, 2023 - Python
Qutip Monte Carlo to solve the dynamics of time-local non-Markovian master equations
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Feb 14, 2024 - Jupyter Notebook
Stochastic Solution Method of the Master Equation and the Model Boltzmann Equation
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Sep 28, 2023 - Mathematica
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