A curated list (with links) of useful tools for genome-wide association analysis.
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Updated
Mar 1, 2019
A curated list (with links) of useful tools for genome-wide association analysis.
R ShinyApp HTMLWidget using the locuszoom.js library found at https://statgen.github.io/locuszoom/
A simple GWAS parser + CLI
A web service to upload and share GWAS results with LocusZoom.js
Make interactive LocusZoom plots from a local GWAS file
A Javascript/d3 embeddable plugin for interactively visualizing statistical genetic data from customizable sources.
Application of the Simple Sum method for testing co-localization of GWAS with any other SNP-level data (e.g. eQTL data)
LocusZoom in Jupyter notebooks
🧬High-performance genetics- and genomics-related data visualization using Makie.jl
A collection of scripts to run GWAS, regional, gene-oriented, or per-variant analyses.
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