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@RajLabMSSM

RajLabMSSM

The Raj Lab investigates neurodegenerative disorders through the application of computational methods to multi-omics data

Popular repositories

  1. echolocatoR echolocatoR Public

    Automated statistical and functional fine-mapping pipeline with extensive API access to datasets.

    R 28 11

  2. ggLocusZoom ggLocusZoom Public archive

    Create LocusZoom-style plots in R.

    R 20 4

  3. catalogueR catalogueR Public

    Easy-to-use R wrappers for the eQTL Catalogue's API (both with tabix and the REST API).

    R 13 1

  4. Fine_Mapping Fine_Mapping Public

    Fine mapping of genes associated with Parkinson's Disease using a variety of methods

    HTML 10 3

  5. AMP_AD_StructuralVariation AMP_AD_StructuralVariation Public

    Repository for the AMP-AD structural variation manuscript

    HTML 7 4

  6. snakeSV snakeSV Public

    Snakemake pipeline for SV discovery and analysis

    Python 6 1

Repositories

Showing 10 of 57 repositories
  • echoLD Public

    echoverse module: LD downloading and processing

    R 0 0 4 0 Updated May 10, 2024
  • downloadR Public

    echoverse module: Single- and multi-threaded downloading functions.

    R 0 0 2 0 Updated May 10, 2024
  • downstream-QTL Public

    set of scripts and pipelines to work with QTL results

    HTML 3 1 6 2 Updated Apr 11, 2024
  • RNA-pipelines Public

    A repo to contain various RNA-seq processing pipelines, to cut down how many different repos I have.

    Python 1 3 4 0 Updated Apr 8, 2024
  • devoptera Public

    ⏩ Practical tools for R developers ⏪ 🔧🦇 🔨🦇 🧰🦇

    R 1 0 0 0 Updated Apr 1, 2024
  • HTML 0 0 0 0 Updated Feb 29, 2024
  • Python 0 0 1 0 Updated Feb 20, 2024
  • isoseq-pipeline Public

    pipeline for working with PacBio long read RNA data using the outputs of isoseq3

    Python 3 4 2 0 Updated Jan 10, 2024
  • RajLab_website Public

    Official website for the Raj Lab detailing personnel, updates, current projects and opportunities.

    CSS 0 GPL-3.0 0 0 0 Updated Dec 18, 2023
  • isoMiGA Public

    The isoform-centric microglia genomic atlas.

    0 1 0 0 Updated Dec 5, 2023

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